Systemic inflammatory response syndrome and septic shock - GSE4607
Goal of the experiment: To identify correlated genes, pathways and groups of patients with systemic inflammatory response syndrome and septic shock that is indicative of ...
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Children < 10 years of age admitted to the pediatric intensive care unit and meeting the criteria for either SIRS or septic shock were eligible for the study. SIRS and ...
Systemic inflammatory response syndrome (2021 ICD-10-CM code* = R65.1)
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Processed with Microarray suite 5.0 (Affymetrix) to generate .CEL files that were subject to RMA normalization (Irizarry et al 2003) using GeneSpring software.Standard ...
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE4607
Sample ID | !Sample Title | Day | survival | organism | infect_site |
---|---|---|---|---|---|
GSM102961 | SampleNumber: 16 | 1 | survivor | none | none |
GSM102962 | SampleNumber: 19 | 1 | survivor | none | none |
GSM102963 | SampleNumber: 20 | 1 | survivor | none | none |
GSM102964 | SampleNumber: 21 | 1 | survivor | none | none |
GSM102965 | SampleNumber: 25 | 1 | survivor | none | none |
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Sample ID | !Sample Title | Day | Survival | Organism | Infect Site | Steroid | 11kMajorGroups | 11kSubGroups | Dx | DxSurv | PRISM | Dx Day | DxSurv Day | Comined Grouping | PtID |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GSM102961 | SampleNumber: 16 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
15_0005 |
GSM102962 | SampleNumber: 19 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
15_0003 |
GSM102963 | SampleNumber: 20 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
15_0002 |
GSM102964 | SampleNumber: 21 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
15_0001 |
GSM102965 | SampleNumber: 25 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0037 |
GSM102966 | SampleNumber: 31 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0027 |
GSM102967 | SampleNumber: 37 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0020 |
GSM102968 | SampleNumber: 38 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0019 |
GSM102969 | SampleNumber: 39 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0018 |
GSM102970 | SampleNumber: 46 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0014 |
GSM102971 | SampleNumber: 47 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0013 |
GSM102972 | SampleNumber: 48 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0012 |
GSM102973 | SampleNumber: 49 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0011 |
GSM102974 | SampleNumber: 51 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0009 |
GSM102975 | SampleNumber: 52 |
1 |
survivor |
none |
none |
no |
Ctrl |
Ctrl |
Control |
Ctrl |
n/a |
Control |
Control |
Control |
11_0008 |
GSM102976 | SampleNumber: 103 |
1 |
nonsurvivor |
Group A Strep |
Blood |
yes |
Grp B |
Grp B3 |
SepticShock |
SepShck_NonSurv |
20 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
04_0005 |
GSM102977 | SampleNumber: 105 |
1 |
nonsurvivor |
Influenza |
Lung |
no |
Grp B |
Grp B2 |
SepticShock |
SepShck_NonSurv |
26 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
04_0003 |
GSM102978 | SampleNumber: 124 |
1 |
nonsurvivor |
n/a |
n/a |
n/a |
Grp C |
Grp C1 |
SepticShock |
SepShck_NonSurv |
n/a |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0013 |
GSM102979 | SampleNumber: 13 |
1 |
nonsurvivor |
Group A Strep |
Blood |
no |
Grp B |
Grp B2 |
SepticShock |
SepShck_NonSurv |
22 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
15_0008 |
GSM102980 | SampleNumber: 41 |
1 |
nonsurvivor |
none |
none |
yes |
Grp C |
Grp C1 |
SepticShock |
SepShck_NonSurv |
20 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
11_0017 |
GSM102981 | SampleNumber: 57 |
1 |
nonsurvivor |
Influenza |
Systemic |
yes |
Grp A |
Grp A4 |
SepticShock |
SepShck_NonSurv |
44 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
10_0020 |
GSM102982 | SampleNumber: 60 |
1 |
nonsurvivor |
CMV |
Blood |
no |
Grp B |
Grp B3 |
SepticShock |
SepShck_NonSurv |
9 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
10_0017 |
GSM102983 | SampleNumber: 7 |
1 |
nonsurvivor |
Neisseria |
Blood |
yes |
Grp C |
Grp C1 |
SepticShock |
SepShck_NonSurv |
59 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
26_260611 |
GSM102984 | SampleNumber: 93 |
1 |
nonsurvivor |
Group B Strep |
blood |
yes |
Grp C |
Grp C3 |
SepticShock |
SepShck_NonSurv |
34 |
SepticShock_Day_1 |
SepShck_NonSurv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
05_0011 |
GSM102985 | SampleNumber: 104 |
3 |
nonsurvivor |
Influenza |
Lung |
yes |
Grp B |
Grp B2 |
SepticShock |
SepShck_NonSurv |
26 |
SepticShock_Day_3 |
SepShck_NonSurv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
04_0003 |
GSM102986 | SampleNumber: 12 |
3 |
nonsurvivor |
Group A Strep |
Blood |
no |
Grp A |
Grp A4 |
SepticShock |
SepShck_NonSurv |
22 |
SepticShock_Day_3 |
SepShck_NonSurv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
15_0008 |
GSM102987 | SampleNumber: 40 |
3 |
nonsurvivor |
none |
none |
yes |
Grp C |
Grp C1 |
SepticShock |
SepShck_NonSurv |
20 |
SepticShock_Day_3 |
SepShck_NonSurv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
11_0017 |
GSM102988 | SampleNumber: 58 |
3 |
nonsurvivor |
Influenza |
Systemic |
yes |
Grp A |
Grp A4 |
SepticShock |
SepShck_NonSurv |
44 |
SepticShock_Day_3 |
SepShck_NonSurv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
10_0020 |
GSM102989 | SampleNumber: 59 |
3 |
nonsurvivor |
CMV |
Blood |
no |
Grp B |
Grp B3 |
SepticShock |
SepShck_NonSurv |
9 |
SepticShock_Day_3 |
SepShck_NonSurv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
10_0017 |
GSM102990 | SampleNumber: 1 |
1 |
survivor |
Strep Pneumo |
Blood |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
6 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
12_0001 |
GSM102991 | SampleNumber: 108 |
1 |
survivor |
none |
none |
yes |
Grp A |
Grp A2 |
SepticShock |
SepShck_Surv |
21 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
02_0001 |
GSM102992 | SampleNumber: 110 |
1 |
survivor |
Candida albicans |
Blood |
yes |
Grp A |
Grp A4 |
SepticShock |
SepShck_Surv |
n/a |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0030 |
GSM102993 | SampleNumber: 114 |
1 |
survivor |
none |
none |
no |
Grp A |
Grp A1 |
SepticShock |
SepShck_Surv |
20 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0026 |
GSM102994 | SampleNumber: 116 |
1 |
survivor |
Strep viridans |
Blood |
no |
Grp A |
Grp A2 |
SepticShock |
SepShck_Surv |
13 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0025 |
GSM102995 | SampleNumber: 118 |
1 |
survivor |
Staph Aureus |
Lung |
no |
Grp A |
Grp A3 |
SepticShock |
SepShck_Surv |
5 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0024 |
GSM102996 | SampleNumber: 119 |
1 |
survivor |
none |
none |
no |
Grp B |
Grp B3 |
SepticShock |
SepShck_Surv |
5 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0021 |
GSM102997 | SampleNumber: 123 |
1 |
survivor |
Candida albicans |
Lung |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
20 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0014 |
GSM102998 | SampleNumber: 15 |
1 |
survivor |
none |
none |
no |
Grp C |
Grp C3 |
SepticShock |
SepShck_Surv |
25 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
15_0007 |
GSM102999 | SampleNumber: 18 |
1 |
survivor |
none |
Lung |
no |
Grp B |
Grp B4 |
SepticShock |
SepShck_Surv |
7 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
15_0004 |
GSM103000 | SampleNumber: 3 |
1 |
survivor |
Group A Strep |
Blood |
yes |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
22 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
05_0007 |
GSM103001 | SampleNumber: 30 |
1 |
survivor |
Neisseria |
Blood |
no |
Grp B |
Grp B2 |
SepticShock |
SepShck_Surv |
10 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
11_0029 |
GSM103002 | SampleNumber: 50 |
1 |
survivor |
none |
none |
no |
Grp A |
Grp A1 |
SepticShock |
SepShck_Surv |
21 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
11_0010 |
GSM103003 | SampleNumber: 56 |
1 |
survivor |
Rotavirus |
Colitis |
yes |
Grp A |
Grp A2 |
SepticShock |
SepShck_Surv |
34 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
11_0001 |
GSM103004 | SampleNumber: 6 |
1 |
survivor |
Staph Epi |
Blood |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
15 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
27_70603 |
GSM103005 | SampleNumber: 64 |
1 |
survivor |
E coli |
Urine |
no |
Grp B |
Grp B3 |
SepticShock |
SepShck_Surv |
25 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
10_0012 |
GSM103006 | SampleNumber: 74 |
1 |
survivor |
mult gram neg |
Blood |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
22 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
10_0001 |
GSM103007 | SampleNumber: 76 |
1 |
survivor |
Neisseria |
Blood |
yes |
Grp C |
Grp C3 |
SepticShock |
SepShck_Surv |
21 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
09_0002 |
GSM103008 | SampleNumber: 78 |
1 |
survivor |
none |
none |
no |
Grp B |
Grp B3 |
SepticShock |
SepShck_Surv |
22 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
09_0001 |
GSM103009 | SampleNumber: 82 |
1 |
survivor |
Varicella |
Systemic |
no |
Grp B |
Grp B2 |
SepticShock |
SepShck_Surv |
17 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
07_0002 |
GSM103010 | SampleNumber: 85 |
1 |
survivor |
none |
Lung |
yes |
Grp A |
Grp A2 |
SepticShock |
SepShck_Surv |
17 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
06_0006 |
GSM103011 | SampleNumber: 87 |
1 |
survivor |
Group B Strep |
Blood and CSF |
no |
Grp A |
Grp A2 |
SepticShock |
SepShck_Surv |
12 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
06_0004 |
GSM103012 | SampleNumber: 89 |
1 |
survivor |
none |
none |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
n/a |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
06_0003 |
GSM103013 | SampleNumber: 92 |
1 |
survivor |
mult gram neg |
Blood |
yes |
Grp C |
Grp C2 |
SepticShock |
SepShck_Surv |
18 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
06_0001 |
GSM103014 | SampleNumber: 95 |
1 |
survivor |
Strep Viridans |
Peritoneal fluid |
no |
Grp B |
Grp B2 |
SepticShock |
SepShck_Surv |
9 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
05_0010 |
GSM103015 | SampleNumber: 97 |
1 |
survivor |
Enterococcus |
Blood |
yes |
Grp C |
Grp C3 |
SepticShock |
SepShck_Surv |
12 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
05_0008 |
GSM103016 | SampleNumber: 99 |
1 |
survivor |
none |
none |
yes |
Grp C |
Grp C2 |
SepticShock |
SepShck_Surv |
12 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
05_0006 |
GSM103017 | SampleNumber: 106 |
3 |
survivor |
E coli |
Blood |
yes |
Grp C |
Grp C2 |
SepticShock |
SepShck_Surv |
16 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
04_0002 |
GSM103018 | SampleNumber: 109 |
3 |
survivor |
Candida albicans |
Blood |
yes |
Grp A |
Grp A4 |
SepticShock |
SepShck_Surv |
n/a |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
01_0030 |
GSM103019 | SampleNumber: 11 |
3 |
survivor |
none |
none |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
24 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
01_0022 |
GSM103020 | SampleNumber: 122 |
3 |
survivor |
Influenza |
Systemic |
no |
Grp A |
Grp A4 |
SepticShock |
SepShck_Surv |
16 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
01_0018 |
GSM103021 | SampleNumber: 14 |
3 |
survivor |
none |
none |
no |
Grp C |
Grp C3 |
SepticShock |
SepShck_Surv |
25 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
15_0007 |
GSM103022 | SampleNumber: 17 |
3 |
survivor |
none |
Lung |
no |
Grp B |
Grp B4 |
SepticShock |
SepShck_Surv |
7 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
15_0004 |
GSM103023 | SampleNumber: 2 |
3 |
survivor |
Group A Strep |
Blood |
yes |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
22 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
05_0007 |
GSM103024 | SampleNumber: 29 |
3 |
survivor |
Neisseria |
Blood |
no |
Grp A |
Grp A3 |
SepticShock |
SepShck_Surv |
10 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
11_0029 |
GSM103025 | SampleNumber: 65 |
3 |
survivor |
none |
Lung |
yes |
Grp B |
Grp B4 |
SepticShock |
SepShck_Surv |
26 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
10_0011 |
GSM103026 | SampleNumber: 83 |
3 |
survivor |
Neisseria |
CSF |
no |
Grp A |
Grp A4 |
SepticShock |
SepShck_Surv |
26 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
07_0001 |
GSM103027 | SampleNumber: 84 |
3 |
survivor |
none |
Lung |
yes |
Grp A |
Grp A2 |
SepticShock |
SepShck_Surv |
17 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
06_0006 |
GSM103028 | SampleNumber: 86 |
3 |
survivor |
Group B Strep |
Blood and CSF |
no |
Grp A |
Grp A3 |
SepticShock |
SepShck_Surv |
12 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
06_0004 |
GSM103029 | SampleNumber: 88 |
3 |
survivor |
none |
none |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
n/a |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
06_0003 |
GSM103030 | SampleNumber: 94 |
3 |
survivor |
Strep Viridans |
Peritoneal fluid |
no |
Grp A |
Grp A3 |
SepticShock |
SepShck_Surv |
9 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
05_0010 |
GSM103031 | SampleNumber: 107 |
3 |
survivor |
none |
none |
yes |
Grp A |
Grp A1 |
SIRS_resolved |
SirsReslv |
21 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
02_0001 |
GSM103032 | SampleNumber: 113 |
3 |
survivor |
none |
none |
no |
Grp A |
Grp A1 |
SIRS_resolved |
SirsReslv |
20 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
01_0026 |
GSM103033 | SampleNumber: 115 |
3 |
survivor |
Strep viridans |
Blood |
no |
Grp A |
Grp A1 |
SepticShock |
SepShck_Surv |
13 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
01_0025 |
GSM103034 | SampleNumber: 117 |
3 |
survivor |
Staph Aureus |
Lung |
no |
Grp A |
Grp A3 |
SIRS_resolved |
SirsReslv |
5 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
01_0024 |
GSM103035 | SampleNumber: 22 |
3 |
survivor |
Staph Aureus |
Cellulitis |
yes |
Grp B |
Grp B1 |
SIRS_resolved |
SirsReslv |
2 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
11_0006 |
GSM103036 | SampleNumber: 24 |
3 |
survivor |
mult gram neg |
Blood |
no |
Grp B |
Grp B1 |
SepticShock |
SepShck_Surv |
22 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
10_0001 |
GSM103037 | SampleNumber: 35 |
3 |
survivor |
none |
Lung |
no |
Grp C |
Grp C3 |
SIRS_resolved |
SirsReslv |
4 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
11_0021 |
GSM103038 | SampleNumber: 42 |
3 |
survivor |
none |
none |
no |
Grp B |
Grp B3 |
SIRS_resolved |
SirsReslv |
21 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
11_0016 |
GSM103039 | SampleNumber: 55 |
3 |
survivor |
Rotavirus |
Colitis |
yes |
Grp A |
Grp A1 |
SIRS_resolved |
SirsReslv |
34 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
11_0001 |
GSM103040 | SampleNumber: 67 |
3 |
survivor |
Eikenella |
Retropharyngeal abscess |
yes |
Grp A |
Grp A1 |
SIRS_resolved |
SirsReslv |
10 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
10_0007 |
GSM103041 | SampleNumber: 81 |
3 |
survivor |
Varicella |
Systemic |
no |
Grp A |
Grp A3 |
SIRS_resolved |
SirsReslv |
17 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
07_0002 |
GSM103042 | SampleNumber: 91 |
3 |
survivor |
mult gram neg |
Blood |
yes |
Grp C |
Grp C2 |
SIRS_resolved |
SirsReslv |
18 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
06_0001 |
GSM103043 | SampleNumber: 96 |
3 |
survivor |
Enterococcus |
Blood |
yes |
Grp A |
Grp A1 |
SIRS_resolved |
SirsReslv |
12 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
05_0008 |
GSM103044 | SampleNumber: 98 |
3 |
survivor |
none |
none |
yes |
Grp B |
Grp B3 |
SepticShock |
SepShck_Surv |
12 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
05_0006 |
GSM103045 | SampleNumber: 27 |
1 |
nonsurvivor |
none |
none |
no |
NC |
NC |
SIRS |
Sirs_NonSurv |
n/a |
SIRS_Day_1 |
Sirs_NonSurv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0036 |
GSM103046 | SampleNumber: 26 |
3 |
nonsurvivor |
none |
none |
no |
Grp A |
Grp A2 |
SIRS |
Sirs_NonSurv |
n/a |
SIRS_Day_3 |
Sirs_NonSurv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
11_0036 |
GSM103047 | SampleNumber: 10 |
1 |
survivor |
Staph Aureus |
Blood |
yes |
Grp C |
Grp C2 |
SepticShock |
SepShck_Surv |
11 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
04_0004 |
GSM103048 | SampleNumber: 101 |
1 |
survivor |
Strep Pneumo |
Blood, CSF, and Lung |
no |
Grp C |
Grp C3 |
SepticShock |
SepShck_Surv |
13 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
05_0003 |
GSM103049 | SampleNumber: 102 |
1 |
survivor |
H. flu |
Lung |
yes |
Grp B |
Grp B4 |
SIRS |
Sirs_Surv |
2 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
05_0002 |
GSM103050 | SampleNumber: 112 |
1 |
survivor |
Pseudomonas |
Lung |
yes |
Grp A |
Grp A3 |
SIRS |
Sirs_Surv |
9 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
01_0027 |
GSM103051 | SampleNumber: 120 |
1 |
survivor |
Herpes simplex |
Systemic |
no |
Grp A |
Grp A4 |
SepticShock |
SepShck_Surv |
23 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
01_0019 |
GSM103052 | SampleNumber: 23 |
1 |
survivor |
Staph Aureus |
Cellulitis |
yes |
Grp B |
Grp B1 |
SIRS |
Sirs_Surv |
2 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0006 |
GSM103053 | SampleNumber: 28 |
1 |
survivor |
none |
none |
no |
Grp A |
Grp A3 |
SIRS |
Sirs_Surv |
n/a |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0031 |
GSM103054 | SampleNumber: 32 |
1 |
survivor |
none |
Lung |
yes |
Grp A |
Grp A2 |
SIRS |
Sirs_Surv |
10 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0024 |
GSM103055 | SampleNumber: 33 |
1 |
survivor |
H. flu |
Blood and CSF |
no |
Grp A |
Grp A3 |
SIRS |
Sirs_Surv |
7 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0023 |
GSM103056 | SampleNumber: 34 |
1 |
survivor |
Neisseria |
Blood and CSF |
yes |
Grp A |
Grp A3 |
SIRS |
Sirs_Surv |
14 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0022 |
GSM103057 | SampleNumber: 36 |
1 |
survivor |
Enterobacter |
Lung |
no |
Grp C |
Grp C3 |
SIRS |
Sirs_Surv |
4 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0021 |
GSM103058 | SampleNumber: 43 |
1 |
survivor |
none |
none |
no |
Grp B |
Grp B3 |
SIRS |
Sirs_Surv |
21 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0016 |
GSM103059 | SampleNumber: 45 |
1 |
survivor |
Staph Aureus |
Lung |
no |
Grp B |
Grp B3 |
SIRS |
Sirs_Surv |
n/a |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0015 |
GSM103060 | SampleNumber: 5 |
1 |
survivor |
Enterococcus |
Urine |
no |
Grp B |
Grp B1 |
SIRS |
Sirs_Surv |
28 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
10_0002 |
GSM103061 | SampleNumber: 53 |
1 |
survivor |
Staph Epi |
Peritoneal fluid |
no |
NC |
NC |
SIRS |
Sirs_Surv |
n/a |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0004 |
GSM103062 | SampleNumber: 54 |
1 |
survivor |
Group B Strep |
Blood and CSF |
no |
Grp A |
Grp A2 |
SIRS |
Sirs_Surv |
n/a |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
11_0003 |
GSM103063 | SampleNumber: 61 |
1 |
survivor |
Candida albicans |
Blood |
no |
Grp B |
Grp B3 |
SIRS |
Sirs_Surv |
6 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
10_0015 |
GSM103064 | SampleNumber: 66 |
1 |
survivor |
Staph Aureus |
Toxic shock syndrome |
yes |
Grp B |
Grp B4 |
SepticShock |
SepShck_Surv |
n/a |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
10_0010 |
GSM103065 | SampleNumber: 68 |
1 |
survivor |
Eikenella |
Retropharyngeal abscess |
no |
Grp A |
Grp A2 |
SIRS |
Sirs_Surv |
10 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
10_0007 |
GSM103066 | SampleNumber: 70 |
1 |
survivor |
none |
Lung |
no |
Grp A |
Grp A2 |
SIRS |
Sirs_Surv |
13 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
10_0006 |
GSM103067 | SampleNumber: 71 |
1 |
survivor |
none |
none |
no |
Grp A |
Grp A1 |
SepticShock |
SepShck_Surv |
6 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
10_0005 |
GSM103068 | SampleNumber: 73 |
1 |
survivor |
Rickettsia |
Systemic |
no |
Grp A |
Grp A2 |
SepticShock |
SepShck_Surv |
10 |
SepticShock_Day_1 |
SepShck_Surv_Day_1 |
SepShck_NonSurv + SepShck_Surv |
10_0004 |
GSM103069 | SampleNumber: 80 |
1 |
survivor |
none |
Appendicitis |
no |
Grp B |
Grp B3 |
SIRS |
Sirs_Surv |
4 |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
07_0005 |
GSM103070 | SampleNumber: 90 |
1 |
survivor |
none |
none |
no |
Grp B |
Grp B4 |
SIRS |
Sirs_Surv |
n/a |
SIRS_Day_1 |
Sirs_Surv_Day_1 |
SIRS_NonSurv + SIRS_Surv |
06_0002 |
GSM103071 | SampleNumber: 111 |
3 |
survivor |
Pseudomonas |
Lung |
yes |
Grp A |
Grp A3 |
SIRS_resolved |
SirsReslv |
9 |
SIRS_resolved_Day_3 |
SirsReslv_Day_3 |
SIRS_Reslv |
01_0027 |
GSM103072 | SampleNumber: 121 |
3 |
survivor |
Herpes simplex |
Systemic |
no |
Grp A |
Grp A4 |
SepticShock |
SepShck_Surv |
23 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
01_0019 |
GSM103073 | SampleNumber: 4 |
3 |
survivor |
Enterococcus |
Urine |
no |
Grp B |
Grp B1 |
SIRS |
Sirs_Surv |
28 |
SIRS_Day_3 |
Sirs_Surv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
10_0002 |
GSM103074 | SampleNumber: 44 |
3 |
survivor |
Staph Aureus |
Lung |
yes |
Grp B |
Grp B3 |
SIRS |
Sirs_Surv |
17 |
SIRS_Day_3 |
Sirs_Surv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
11_0015 |
GSM103075 | SampleNumber: 62 |
3 |
survivor |
C. diff. |
Colitis |
yes |
Grp C |
Grp C2 |
SepticShock |
SepShck_Surv |
11 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
10_0013 |
GSM103076 | SampleNumber: 63 |
3 |
survivor |
E coli |
Urine |
no |
Grp B |
Grp B3 |
SepticShock |
SepShck_Surv |
25 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
10_0012 |
GSM103077 | SampleNumber: 69 |
3 |
survivor |
none |
Lung |
no |
Grp A |
Grp A2 |
SIRS |
Sirs_Surv |
13 |
SIRS_Day_3 |
Sirs_Surv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
10_0006 |
GSM103078 | SampleNumber: 72 |
3 |
survivor |
Rickettsia |
Systemic |
yes |
Grp A |
Grp A1 |
SIRS |
Sirs_Surv |
10 |
SIRS_Day_3 |
Sirs_Surv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
10_0004 |
GSM103079 | SampleNumber: 75 |
3 |
survivor |
Neisseria |
Blood |
yes |
Grp B |
Grp B2 |
SepticShock |
SepShck_Surv |
21 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
09_0002 |
GSM103080 | SampleNumber: 77 |
3 |
survivor |
none |
none |
no |
Grp B |
Grp B3 |
SIRS |
Sirs_Surv |
22 |
SIRS_Day_3 |
Sirs_Surv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
09_0001 |
GSM103081 | SampleNumber: 79 |
3 |
survivor |
none |
Appendicitis |
no |
Grp B |
Grp B3 |
SIRS |
Sirs_Surv |
4 |
SIRS_Day_3 |
Sirs_Surv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
07_0005 |
GSM103082 | SampleNumber: 8 |
3 |
survivor |
none |
none |
no |
Grp B |
Grp B1 |
SIRS |
Sirs_Surv |
n/a |
SIRS_Day_3 |
Sirs_Surv_Day_3 |
SIRS_NonSurv + SIRS_Surv |
25_70603_sepsis |
GSM103083 | SampleNumber: 9 |
3 |
survivor |
Staph Aureus |
Blood |
yes |
Grp C |
Grp C2 |
SepticShock |
SepShck_Surv |
11 |
SepticShock_Day_3 |
SepShck_Surv_Day_3 |
SepShck_NonSurv + SepShck_Surv |
04_0004 |
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