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Clinical

Temporal Analysis of Platelets as Cytotoxic Mediators in Sepsis-induced Acute Lung Injury (ALI) - GSE10361

Purpose

ALI is one of the most common disease processes in adult and pediatric intensive care units and results in significant morbidity and mortality. The pathophysiology of ALI begins with a massive pro-inflammatory response likely mediated by as yet uncharacterized platelet/endothelium interactions with macrophage activation. This leads to a cytokine/chemokine cascade producing endothelial disruption. Neutrophilic infiltration of the alveolar wall and alveolar space with a concomitant procoagulant state develops. Despite the fact that inadequate understanding of ALI pathophysiology remains a barrier to effective treatment, novel therapeutics including ventilatory manipulations and anti-inflammatory molecules are beginning to improve the morbidity and mortality associated with this disease process.Keywords: Time Series Design, ALI - acute lung injury, ARDS - acute respiratory distress syndrome

Hypothesis

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Experimental Design

Acute Lung Injury (ALI) represents a spectrum of critical pulmonary illness in which inflammatory processes lead to varying degrees of alveolar damage and respiratory failure. ALI is a common disease process in the intensive care unit (ICU) with high morbidity and mortality. Based on new insights into the molecular processes of lung injury, we hypothesize that a temporal analysis of cells of innate immunity and thrombosis will demonstrate changes in mRNA and protein expression that are significantly associated with progression of ALI. Additionally, the analysis of the resulting datasets will lead to an unprecedented understanding of the pathogenesis of ALI.

Experimental Variables

Acute respiratory distress syndrome due to sepsis (2021 ICD-10-CM code* = J80-A41)

Controls

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Methods

Affymetrix STATISTICAL_ALGORITHM_TYPE

Additional Information

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE10361

Microarray
Affymetrix HG-U133A
9 Samples Loaded: 9
Human (Homo sapiens)
Whole Blood
Acute respiratory distress syndrome due to sepsis
standard Affymetrix procedures
Sample Set Spreadsheet
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Samples Preview
Sample ID !Sample Title time Grouping hour Time series
GSM260537 AGEI-0h_ARDS15-1UA 0h; Septic progress:ARDS15; Sepsis Sepsis 0h
GSM260541 AGEI-0h_ARDS20-1UA 0h; Septic progress:ARDS20; Sepsis Sepsis 0h
GSM260542 AGEI-0h_ARDS9-1UA 0h; Septic progress:ARDS9; Sepsis Sepsis 0h
GSM261573 AGEI-72h_ARDS15-1UA 72h; Septic progress:ARDS15; Sepsis Sepsis 72h
GSM261575 AGEI-72h_ARDS20-1UA 72h; Septic progress:ARDS20; Sepsis Sepsis 72h
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File
sampleset4000125_sampleannotations_GSE10361_new.csv
Sample Set Spreadsheet
sampleset4000125_sampleannotations_GSE10361_new.csv
Sample Set Spreadsheet
Raw Signal
Raw Signal
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Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID !Sample Title Time Grouping Hour Time series
GSM260537
AGEI-0h_ARDS15-1UA
0h; Septic progress:ARDS15;
Sepsis
 
Sepsis 0h
GSM260541
AGEI-0h_ARDS20-1UA
0h; Septic progress:ARDS20;
Sepsis
 
Sepsis 0h
GSM260542
AGEI-0h_ARDS9-1UA
0h; Septic progress:ARDS9;
Sepsis
 
Sepsis 0h
GSM261573
AGEI-72h_ARDS15-1UA
72h; Septic progress:ARDS15;
Sepsis
 
Sepsis 72h
GSM261575
AGEI-72h_ARDS20-1UA
72h; Septic progress:ARDS20;
Sepsis
 
Sepsis 72h
GSM261580
AGEI-72h_ARDS9-1UA
72h; Septic progress:ARDS9;
Sepsis
 
Sepsis 72h
GSM261581
RAL-CtrPlate_0h-3aUAc-s2
 
Control
0 hour; cell type:Platelets;
Control 0h
GSM261913
RAL-CtrPlate_0h-1aUAc-s2
 
Control
0 hour; cell type:Platelets;
Control 0h
GSM261914
RAL-CtrPlate_0h-4aUA-s2
 
Control
0 hour; cell type:Platelets;
Control 0h

Group Sets View in Gene Expression Browser

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