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Clinical

Diagnosis of childhood bacterial and viral infection using host RNA expression- Discovery set and Inflammatory validation cohort - GSE72829-GPL10558 - Also, deposited as SubSeries (GSE72809 and GSE80412)

Purpose

Genome-wide analysis of transcriptional profiles in children <17 years of age with bacterial or viral infections or with clinical features suggestive of infection. This is also deposited as SubSeries (GSE72809 and GSE80412)

Hypothesis

--

Experimental Design

Overall design [Discovery set]

Patients were recruited at or after presentation to hospital. Main inclusion criteria were presence of illness of sufficient severity to warrant blood tests for clinical reasons, in child aged <17 years. Blood was collected into PAX gene tubes (PreAnalytiX). Total RNA integrity was assessed using an Agilent 2100 Bioanalyzer (Agilent, Palo Alto, CA). Labeled cRNA was hybridized to Illumina Human HT-12 v4 Beadchips (Discovery set) or Illumina Human HT-12 V3 Beadchips (Validation set). Numbers of arrays analysed were as follows: Definite Bacterial infection (n=52), Definite Viral infection (n=92), Probable Bacterial infection (n=42), Probable Viral infection (n=5), infections of uncertain bacterial or viral aetiology (n=49), Healthy controls (n=52).

Overall design [Inflammatory validation cohort]

Patients were recruited at or after presentation to hospital. Main inclusion criteria were presence of illness of sufficient severity to warrant blood tests for clinical reasons, in child aged <17 years. Blood was collected into PAX gene tubes (PreAnalytiX). Total RNA integrity was assessed using an Agilent 2100 Bioanalyzer (Agilent, Palo Alto, CA). Labeled cRNA was hybridized to Illumina Human HT-12 v4 Beadchips. Numbers of arrays analysed were as follows: HSP (n=18), JIA (n=30)

Experimental Variables

Bacterial infection (2021 ICD-10-CM code* = A49.9)

Viral infection (2021 ICD-10-CM code* = B99.9)

Henoch-Schonlein purpura (2021 ICD-10-CM code* = D69.0)

Juvenile idiopathic arthritis (2021 ICD-10-CM code* = M08.90)

Controls

--

Methods

Overall design [Discovery set]

The data were normalised using RSN, after background subtraction and filtering for transcripts common to Illumina HT12-V3 The software used for data normalization was 'R' Language and Environment for Statistical Computing (R) 3.1.2

Overall design [Inflammatory validation cohort]

The data were normalised using RSN, after background subtraction and filtering for transcripts common to Illumina HT12-V3

Additional Information

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72829

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE72809 [Discovery set]

https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE80412 [Inflammatory validation cohort]

Microarray
Illumina HumanHT-12 v4
340 Samples Loaded: 340
Human (Homo sapiens)
Whole Blood
Bacterial infection, Viral infection, Henoch-Schonlein purpura and Juvenile idiopathic arthritis
Standard PAXgene blood RNA extraction kit protocol (Qiagen).
Sample Set Spreadsheet
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Samples Preview
Sample ID Gender !Sample_title tissue dataset category
GSM1872417 Female Definite Bacterial_01 Whole Blood Discovery Definite Bacterial
GSM1872418 Female Definite Bacterial_02 Whole Blood Discovery Definite Bacterial
GSM1872419 Female Definite Bacterial_03 Whole Blood Discovery Definite Bacterial
GSM1872420 Male Definite Bacterial_04 Whole Blood Discovery Definite Bacterial
GSM1872421 Male Definite Bacterial_05 Whole Blood Discovery Definite Bacterial
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File
Raw Signal
Raw Signal
  •   |  View in GXB »
Clinical Datasource
Links

Samples Viewer / Editor

All fields are editable except the "Sample ID" column. To edit a cell, click within the cell. To edit a "date" cell, click on the calendar icon. To cancel an edit, press the ESC key.

Sample ID Gender !Sample Title Tissue Dataset Category
GSM1872417
Female
Definite Bacterial_01
Whole Blood
Discovery
Definite Bacterial
GSM1872418
Female
Definite Bacterial_02
Whole Blood
Discovery
Definite Bacterial
GSM1872419
Female
Definite Bacterial_03
Whole Blood
Discovery
Definite Bacterial
GSM1872420
Male
Definite Bacterial_04
Whole Blood
Discovery
Definite Bacterial
GSM1872421
Male
Definite Bacterial_05
Whole Blood
Discovery
Definite Bacterial
GSM1872422
Female
Definite Bacterial_06
Whole Blood
Discovery
Definite Bacterial
GSM1872423
Male
Definite Bacterial_07
Whole Blood
Discovery
Definite Bacterial
GSM1872424
Female
Definite Bacterial_08
Whole Blood
Discovery
Definite Bacterial
GSM1872425
Female
Definite Bacterial_09
Whole Blood
Discovery
Definite Bacterial
GSM1872426
Female
Definite Bacterial_10
Whole Blood
Discovery
Definite Bacterial
GSM1872427
Male
Definite Bacterial_11
Whole Blood
Discovery
Definite Bacterial
GSM1872428
Male
Definite Bacterial_12
Whole Blood
Discovery
Definite Bacterial
GSM1872429
Female
Definite Bacterial_13
Whole Blood
Discovery
Definite Bacterial
GSM1872430
Male
Definite Bacterial_14
Whole Blood
Discovery
Definite Bacterial
GSM1872431
Male
Definite Bacterial_15
Whole Blood
Discovery
Definite Bacterial
GSM1872432
Female
Definite Bacterial_16
Whole Blood
Discovery
Definite Bacterial
GSM1872433
Male
Definite Bacterial_17
Whole Blood
Discovery
Definite Bacterial
GSM1872434
Female
Definite Bacterial_18
Whole Blood
Discovery
Definite Bacterial
GSM1872435
Female
Definite Bacterial_19
Whole Blood
Discovery
Definite Bacterial
GSM1872436
Male
Definite Bacterial_20
Whole Blood
Discovery
Definite Bacterial
GSM1872437
Male
Definite Bacterial_21
Whole Blood
Discovery
Definite Bacterial
GSM1872438
Female
Definite Bacterial_22
Whole Blood
Discovery
Definite Bacterial
GSM1872439
Female
Definite Bacterial_23
Whole Blood
Discovery
Definite Bacterial
GSM1872440
Female
Definite Bacterial_24
Whole Blood
Discovery
Definite Bacterial
GSM1872441
Female
Definite Bacterial_25
Whole Blood
Discovery
Definite Bacterial
GSM1872442
Female
Definite Bacterial_26
Whole Blood
Discovery
Definite Bacterial
GSM1872443
Female
Definite Bacterial_27
Whole Blood
Discovery
Definite Bacterial
GSM1872444
Female
Definite Bacterial_28
Whole Blood
Discovery
Definite Bacterial
GSM1872445
Female
Definite Bacterial_29
Whole Blood
Discovery
Definite Bacterial
GSM1872446
Male
Definite Bacterial_30
Whole Blood
Discovery
Definite Bacterial
GSM1872447
Male
Definite Bacterial_31
Whole Blood
Discovery
Definite Bacterial
GSM1872448
Male
Definite Bacterial_32
Whole Blood
Discovery
Definite Bacterial
GSM1872449
Female
Definite Bacterial_33
Whole Blood
Discovery
Definite Bacterial
GSM1872450
Female
Definite Bacterial_34
Whole Blood
Discovery
Definite Bacterial
GSM1872451
Male
Definite Bacterial_35
Whole Blood
Discovery
Definite Bacterial
GSM1872452
Male
Definite Bacterial_36
Whole Blood
Discovery
Definite Bacterial
GSM1872453
Male
Definite Bacterial_37
Whole Blood
Discovery
Definite Bacterial
GSM1872454
Male
Definite Bacterial_38
Whole Blood
Discovery
Definite Bacterial
GSM1872455
Male
Definite Bacterial_39
Whole Blood
Discovery
Definite Bacterial
GSM1872456
Female
Definite Bacterial_40
Whole Blood
Discovery
Definite Bacterial
GSM1872457
Male
Definite Bacterial_41
Whole Blood
Discovery
Definite Bacterial
GSM1872458
Female
Definite Bacterial_42
Whole Blood
Discovery
Definite Bacterial
GSM1872459
Male
Definite Bacterial_43
Whole Blood
Discovery
Definite Bacterial
GSM1872460
Female
Definite Bacterial_44
Whole Blood
Discovery
Definite Bacterial
GSM1872461
Female
Definite Bacterial_45
Whole Blood
Discovery
Definite Bacterial
GSM1872462
Female
Definite Bacterial_46
Whole Blood
Discovery
Definite Bacterial
GSM1872463
Female
Definite Bacterial_47
Whole Blood
Discovery
Definite Bacterial
GSM1872464
Male
Definite Bacterial_48
Whole Blood
Discovery
Definite Bacterial
GSM1872465
Female
Definite Bacterial_49
Whole Blood
Discovery
Definite Bacterial
GSM1872466
Male
Definite Bacterial_50
Whole Blood
Discovery
Definite Bacterial
GSM1872467
Female
Definite Bacterial_51
Whole Blood
Discovery
Definite Bacterial
GSM1872468
Female
Definite Bacterial_52
Whole Blood
Discovery
Definite Bacterial
GSM1872469
Female
Definite Viral_01
Whole Blood
Discovery
Definite Viral
GSM1872470
Male
Definite Viral_02
Whole Blood
Discovery
Definite Viral
GSM1872471
Male
Definite Viral_03
Whole Blood
Discovery
Definite Viral
GSM1872472
Female
Definite Viral_04
Whole Blood
Discovery
Definite Viral
GSM1872473
Male
Definite Viral_05
Whole Blood
Discovery
Definite Viral
GSM1872474
Male
Definite Viral_06
Whole Blood
Discovery
Definite Viral
GSM1872475
Male
Definite Viral_07
Whole Blood
Discovery
Definite Viral
GSM1872476
Male
Definite Viral_08
Whole Blood
Discovery
Definite Viral
GSM1872477
Male
Definite Viral_09
Whole Blood
Discovery
Definite Viral
GSM1872478
Male
Definite Viral_10
Whole Blood
Discovery
Definite Viral
GSM1872479
Male
Definite Viral_11
Whole Blood
Discovery
Definite Viral
GSM1872480
Female
Definite Viral_12
Whole Blood
Discovery
Definite Viral
GSM1872481
Male
Definite Viral_13
Whole Blood
Discovery
Definite Viral
GSM1872482
Male
Definite Viral_14
Whole Blood
Discovery
Definite Viral
GSM1872483
Female
Definite Viral_15
Whole Blood
Discovery
Definite Viral
GSM1872484
Male
Definite Viral_16
Whole Blood
Discovery
Definite Viral
GSM1872485
Male
Definite Viral_17
Whole Blood
Discovery
Definite Viral
GSM1872486
Male
Definite Viral_18
Whole Blood
Discovery
Definite Viral
GSM1872487
Female
Definite Viral_19
Whole Blood
Discovery
Definite Viral
GSM1872488
Male
Definite Viral_20
Whole Blood
Discovery
Definite Viral
GSM1872489
Male
Definite Viral_21
Whole Blood
Discovery
Definite Viral
GSM1872490
Male
Definite Viral_22
Whole Blood
Discovery
Definite Viral
GSM1872491
Female
Definite Viral_23
Whole Blood
Discovery
Definite Viral
GSM1872492
Male
Definite Viral_24
Whole Blood
Discovery
Definite Viral
GSM1872493
Female
Definite Viral_25
Whole Blood
Discovery
Definite Viral
GSM1872494
Male
Definite Viral_26
Whole Blood
Discovery
Definite Viral
GSM1872495
Male
Definite Viral_27
Whole Blood
Discovery
Definite Viral
GSM1872496
Male
Definite Viral_28
Whole Blood
Discovery
Definite Viral
GSM1872497
Male
Definite Viral_29
Whole Blood
Discovery
Definite Viral
GSM1872498
Male
Definite Viral_30
Whole Blood
Discovery
Definite Viral
GSM1872499
Male
Definite Viral_31
Whole Blood
Discovery
Definite Viral
GSM1872500
Male
Definite Viral_32
Whole Blood
Discovery
Definite Viral
GSM1872501
Male
Definite Viral_33
Whole Blood
Discovery
Definite Viral
GSM1872502
Female
Definite Viral_34
Whole Blood
Discovery
Definite Viral
GSM1872503
Male
Definite Viral_35
Whole Blood
Discovery
Definite Viral
GSM1872504
Female
Definite Viral_36
Whole Blood
Discovery
Definite Viral
GSM1872505
Female
Definite Viral_37
Whole Blood
Discovery
Definite Viral
GSM1872506
Male
Definite Viral_38
Whole Blood
Discovery
Definite Viral
GSM1872507
Female
Definite Viral_39
Whole Blood
Discovery
Definite Viral
GSM1872508
Female
Definite Viral_40
Whole Blood
Discovery
Definite Viral
GSM1872509
Male
Definite Viral_41
Whole Blood
Discovery
Definite Viral
GSM1872510
Female
Definite Viral_42
Whole Blood
Discovery
Definite Viral
GSM1872511
Female
Definite Viral_43
Whole Blood
Discovery
Definite Viral
GSM1872512
Male
Definite Viral_44
Whole Blood
Discovery
Definite Viral
GSM1872513
Male
Definite Viral_45
Whole Blood
Discovery
Definite Viral
GSM1872514
Male
Definite Viral_46
Whole Blood
Discovery
Definite Viral
GSM1872515
Male
Definite Viral_47
Whole Blood
Discovery
Definite Viral
GSM1872516
Male
Definite Viral_48
Whole Blood
Discovery
Definite Viral
GSM1872517
Female
Definite Viral_49
Whole Blood
Discovery
Definite Viral
GSM1872518
Female
Definite Viral_50
Whole Blood
Discovery
Definite Viral
GSM1872519
Female
Definite Viral_51
Whole Blood
Discovery
Definite Viral
GSM1872520
Male
Definite Viral_52
Whole Blood
Discovery
Definite Viral
GSM1872521
Male
Definite Viral_53
Whole Blood
Discovery
Definite Viral
GSM1872522
Male
Definite Viral_54
Whole Blood
Discovery
Definite Viral
GSM1872523
Male
Definite Viral_55
Whole Blood
Discovery
Definite Viral
GSM1872524
Male
Definite Viral_56
Whole Blood
Discovery
Definite Viral
GSM1872525
Male
Definite Viral_57
Whole Blood
Discovery
Definite Viral
GSM1872526
Male
Definite Viral_58
Whole Blood
Discovery
Definite Viral
GSM1872527
Male
Definite Viral_59
Whole Blood
Discovery
Definite Viral
GSM1872528
Male
Definite Viral_60
Whole Blood
Discovery
Definite Viral
GSM1872529
Male
Definite Viral_61
Whole Blood
Discovery
Definite Viral
GSM1872530
Male
Definite Viral_62
Whole Blood
Discovery
Definite Viral
GSM1872531
Female
Definite Viral_63
Whole Blood
Discovery
Definite Viral
GSM1872532
Male
Definite Viral_64
Whole Blood
Discovery
Definite Viral
GSM1872533
Male
Definite Viral_65
Whole Blood
Discovery
Definite Viral
GSM1872534
Male
Definite Viral_66
Whole Blood
Discovery
Definite Viral
GSM1872535
Female
Definite Viral_67
Whole Blood
Discovery
Definite Viral
GSM1872536
Female
Definite Viral_68
Whole Blood
Discovery
Definite Viral
GSM1872537
Male
Definite Viral_69
Whole Blood
Discovery
Definite Viral
GSM1872538
Female
Definite Viral_70
Whole Blood
Discovery
Definite Viral
GSM1872539
Male
Definite Viral_71
Whole Blood
Discovery
Definite Viral
GSM1872540
Female
Definite Viral_72
Whole Blood
Discovery
Definite Viral
GSM1872541
Female
Definite Viral_73
Whole Blood
Discovery
Definite Viral
GSM1872542
Male
Definite Viral_74
Whole Blood
Discovery
Definite Viral
GSM1872543
Female
Definite Viral_75
Whole Blood
Discovery
Definite Viral
GSM1872544
Male
Definite Viral_76
Whole Blood
Discovery
Definite Viral
GSM1872545
Male
Definite Viral_77
Whole Blood
Discovery
Definite Viral
GSM1872546
Male
Definite Viral_78
Whole Blood
Discovery
Definite Viral
GSM1872547
Male
Definite Viral_79
Whole Blood
Discovery
Definite Viral
GSM1872548
Male
Definite Viral_80
Whole Blood
Discovery
Definite Viral
GSM1872549
Male
Definite Viral_81
Whole Blood
Discovery
Definite Viral
GSM1872550
Male
Definite Viral_82
Whole Blood
Discovery
Definite Viral
GSM1872551
Female
Definite Viral_83
Whole Blood
Discovery
Definite Viral
GSM1872552
Male
Definite Viral_84
Whole Blood
Discovery
Definite Viral
GSM1872553
Male
Definite Viral_85
Whole Blood
Discovery
Definite Viral
GSM1872554
Male
Definite Viral_86
Whole Blood
Discovery
Definite Viral
GSM1872555
Male
Definite Viral_87
Whole Blood
Discovery
Definite Viral
GSM1872556
Female
Definite Viral_88
Whole Blood
Discovery
Definite Viral
GSM1872557
Male
Definite Viral_89
Whole Blood
Discovery
Definite Viral
GSM1872558
Male
Definite Viral_90
Whole Blood
Discovery
Definite Viral
GSM1872559
Female
Definite Viral_91
Whole Blood
Discovery
Definite Viral
GSM1872560
Male
Definite Viral_92
Whole Blood
Discovery
Definite Viral
GSM1872561
Male
Probable Bacterial_01
Whole Blood
Discovery
Probable Bacterial
GSM1872562
Male
Probable Bacterial_02
Whole Blood
Discovery
Probable Bacterial
GSM1872563
Male
Probable Bacterial_03
Whole Blood
Discovery
Probable Bacterial
GSM1872564
Male
Probable Bacterial_04
Whole Blood
Discovery
Probable Bacterial
GSM1872565
Female
Probable Bacterial_05
Whole Blood
Discovery
Probable Bacterial
GSM1872566
Male
Probable Bacterial_06
Whole Blood
Discovery
Probable Bacterial
GSM1872567
Female
Probable Bacterial_07
Whole Blood
Discovery
Probable Bacterial
GSM1872568
Male
Probable Bacterial_08
Whole Blood
Discovery
Probable Bacterial
GSM1872569
Female
Probable Bacterial_09
Whole Blood
Discovery
Probable Bacterial
GSM1872570
Male
Probable Bacterial_10
Whole Blood
Discovery
Probable Bacterial
GSM1872571
Female
Probable Bacterial_11
Whole Blood
Discovery
Probable Bacterial
GSM1872572
Female
Probable Bacterial_12
Whole Blood
Discovery
Probable Bacterial
GSM1872573
Female
Probable Bacterial_13
Whole Blood
Discovery
Probable Bacterial
GSM1872574
Male
Probable Bacterial_14
Whole Blood
Discovery
Probable Bacterial
GSM1872575
Male
Probable Bacterial_15
Whole Blood
Discovery
Probable Bacterial
GSM1872576
Female
Probable Bacterial_16
Whole Blood
Discovery
Probable Bacterial
GSM1872577
Female
Probable Bacterial_17
Whole Blood
Discovery
Probable Bacterial
GSM1872578
Female
Probable Bacterial_18
Whole Blood
Discovery
Probable Bacterial
GSM1872579
Male
Probable Bacterial_19
Whole Blood
Discovery
Probable Bacterial
GSM1872580
Female
Probable Bacterial_20
Whole Blood
Discovery
Probable Bacterial
GSM1872581
Female
Probable Bacterial_21
Whole Blood
Discovery
Probable Bacterial
GSM1872582
Male
Probable Bacterial_22
Whole Blood
Discovery
Probable Bacterial
GSM1872583
Male
Probable Bacterial_23
Whole Blood
Discovery
Probable Bacterial
GSM1872584
Male
Probable Bacterial_24
Whole Blood
Discovery
Probable Bacterial
GSM1872585
Male
Probable Bacterial_25
Whole Blood
Discovery
Probable Bacterial
GSM1872586
Male
Probable Bacterial_26
Whole Blood
Discovery
Probable Bacterial
GSM1872587
Female
Probable Bacterial_27
Whole Blood
Discovery
Probable Bacterial
GSM1872588
Female
Probable Bacterial_28
Whole Blood
Discovery
Probable Bacterial
GSM1872589
Female
Probable Bacterial_29
Whole Blood
Discovery
Probable Bacterial
GSM1872590
Male
Probable Bacterial_30
Whole Blood
Discovery
Probable Bacterial
GSM1872591
Female
Probable Bacterial_31
Whole Blood
Discovery
Probable Bacterial
GSM1872592
Male
Probable Bacterial_32
Whole Blood
Discovery
Probable Bacterial
GSM1872593
Male
Probable Bacterial_33
Whole Blood
Discovery
Probable Bacterial
GSM1872594
Female
Probable Bacterial_34
Whole Blood
Discovery
Probable Bacterial
GSM1872595
Male
Probable Bacterial_35
Whole Blood
Discovery
Probable Bacterial
GSM1872596
Female
Probable Bacterial_36
Whole Blood
Discovery
Probable Bacterial
GSM1872597
Male
Probable Bacterial_37
Whole Blood
Discovery
Probable Bacterial
GSM1872598
Male
Probable Bacterial_38
Whole Blood
Discovery
Probable Bacterial
GSM1872599
Male
Probable Bacterial_39
Whole Blood
Discovery
Probable Bacterial
GSM1872600
Male
Probable Bacterial_40
Whole Blood
Discovery
Probable Bacterial
GSM1872601
Female
Probable Bacterial_41
Whole Blood
Discovery
Probable Bacterial
GSM1872602
Male
Probable Bacterial_42
Whole Blood
Discovery
Probable Bacterial
GSM1872603
Male
Probable Viral_01
Whole Blood
Discovery
Probable Viral
GSM1872604
Male
Probable Viral_02
Whole Blood
Discovery
Probable Viral
GSM1872605
Male
Probable Viral_03
Whole Blood
Discovery
Probable Viral
GSM1872606
Female
Probable Viral_04
Whole Blood
Discovery
Probable Viral
GSM1872607
Male
Probable Viral_05
Whole Blood
Discovery
Probable Viral
GSM1872608
Male
Unknown_01
Whole Blood
Discovery
Uncertain
GSM1872609
Male
Unknown_02
Whole Blood
Discovery
Uncertain
GSM1872610
Female
Unknown_03
Whole Blood
Discovery
Uncertain
GSM1872611
Male
Unknown_04
Whole Blood
Discovery
Uncertain
GSM1872612
Male
Unknown_05
Whole Blood
Discovery
Uncertain
GSM1872613
Male
Unknown_06
Whole Blood
Discovery
Uncertain
GSM1872614
Male
Unknown_07
Whole Blood
Discovery
Uncertain
GSM1872615
Male
Unknown_08
Whole Blood
Discovery
Uncertain
GSM1872616
Male
Unknown_09
Whole Blood
Discovery
Uncertain
GSM1872617
Female
Unknown_10
Whole Blood
Discovery
Uncertain
GSM1872618
Male
Unknown_11
Whole Blood
Discovery
Uncertain
GSM1872619
Male
Unknown_12
Whole Blood
Discovery
Uncertain
GSM1872620
Female
Unknown_13
Whole Blood
Discovery
Uncertain
GSM1872621
Female
Unknown_14
Whole Blood
Discovery
Uncertain
GSM1872622
Female
Unknown_15
Whole Blood
Discovery
Uncertain
GSM1872623
Female
Unknown_16
Whole Blood
Discovery
Uncertain
GSM1872624
Female
Unknown_17
Whole Blood
Discovery
Uncertain
GSM1872625
Male
Unknown_18
Whole Blood
Discovery
Uncertain
GSM1872626
Female
Unknown_19
Whole Blood
Discovery
Uncertain
GSM1872627
Male
Unknown_20
Whole Blood
Discovery
Uncertain
GSM1872628
Female
Unknown_21
Whole Blood
Discovery
Uncertain
GSM1872629
Male
Unknown_22
Whole Blood
Discovery
Uncertain
GSM1872630
Male
Unknown_23
Whole Blood
Discovery
Uncertain
GSM1872631
Male
Unknown_24
Whole Blood
Discovery
Uncertain
GSM1872632
Male
Unknown_25
Whole Blood
Discovery
Uncertain
GSM1872633
Male
Unknown_26
Whole Blood
Discovery
Uncertain
GSM1872634
Male
Unknown_27
Whole Blood
Discovery
Uncertain
GSM1872635
Male
Unknown_28
Whole Blood
Discovery
Uncertain
GSM1872636
Male
Unknown_29
Whole Blood
Discovery
Uncertain
GSM1872637
Female
Unknown_30
Whole Blood
Discovery
Uncertain
GSM1872638
Male
Unknown_31
Whole Blood
Discovery
Uncertain
GSM1872639
Male
Unknown_32
Whole Blood
Discovery
Uncertain
GSM1872640
Female
Unknown_33
Whole Blood
Discovery
Uncertain
GSM1872641
Male
Unknown_34
Whole Blood
Discovery
Uncertain
GSM1872642
Male
Unknown_35
Whole Blood
Discovery
Uncertain
GSM1872643
Male
Unknown_36
Whole Blood
Discovery
Uncertain
GSM1872644
Male
Unknown_37
Whole Blood
Discovery
Uncertain
GSM1872645
Male
Unknown_38
Whole Blood
Discovery
Uncertain
GSM1872646
Male
Unknown_39
Whole Blood
Discovery
Uncertain
GSM1872647
Male
Unknown_40
Whole Blood
Discovery
Uncertain
GSM1872648
Male
Unknown_41
Whole Blood
Discovery
Uncertain
GSM1872649
Male
Unknown_42
Whole Blood
Discovery
Uncertain
GSM1872650
Male
Unknown_43
Whole Blood
Discovery
Uncertain
GSM1872651
Male
Unknown_44
Whole Blood
Discovery
Uncertain
GSM1872652
Male
Unknown_45
Whole Blood
Discovery
Uncertain
GSM1872653
Female
Unknown_46
Whole Blood
Discovery
Uncertain
GSM1872654
Female
Unknown_47
Whole Blood
Discovery
Uncertain
GSM1872655
Female
Unknown_48
Whole Blood
Discovery
Uncertain
GSM1872656
Female
Unknown_49
Whole Blood
Discovery
Uncertain
GSM2126130
Female
Control-04
whole blood
Discovery
Control
GSM2126131
Female
Control-05
whole blood
Discovery
Control
GSM2126132
Male
Control-06
whole blood
Discovery
Control
GSM2126133
Female
Control-07
whole blood
Discovery
Control
GSM2126134
Female
Control-08
whole blood
Discovery
Control
GSM2126135
Female
Control-09
whole blood
Discovery
Control
GSM2126136
Male
Control-10
whole blood
Discovery
Control
GSM2126137
Male
Control-11
whole blood
Discovery
Control
GSM2126138
Male
Control-12
whole blood
Discovery
Control
GSM2126139
Female
Control-13
whole blood
Discovery
Control
GSM2126140
Male
Control-14
whole blood
Discovery
Control
GSM2126141
Male
Control-15
whole blood
Discovery
Control
GSM2126142
Male
Control-16
whole blood
Discovery
Control
GSM2126143
Female
Control-17
whole blood
Discovery
Control
GSM2126144
Female
Control-18
whole blood
Discovery
Control
GSM2126145
Male
Control-19
whole blood
Discovery
Control
GSM2126146
Male
Control-20
whole blood
Discovery
Control
GSM2126147
Female
Control-21
whole blood
Discovery
Control
GSM2126148
Female
Control-22
whole blood
Discovery
Control
GSM2126149
Female
Control-23
whole blood
Discovery
Control
GSM2126150
Female
Control-24
whole blood
Discovery
Control
GSM2126151
Male
Control-25
whole blood
Discovery
Control
GSM2126152
Male
Control-26
whole blood
Discovery
Control
GSM2126153
Female
Control-27
whole blood
Discovery
Control
GSM2126154
Female
Control-28
whole blood
Discovery
Control
GSM2126155
Male
Control-29
whole blood
Discovery
Control
GSM2126156
Female
Control-30
whole blood
Discovery
Control
GSM2126157
Male
Control-31
whole blood
Discovery
Control
GSM2126158
Male
Control-32
whole blood
Discovery
Control
GSM2126159
Female
Control-33
whole blood
Discovery
Control
GSM2126160
Male
Control-34
whole blood
Discovery
Control
GSM2126161
Male
Control-35
whole blood
Discovery
Control
GSM2126162
Female
Control-36
whole blood
Discovery
Control
GSM2126163
Male
Control-37
whole blood
Discovery
Control
GSM2126164
Male
Control-38
whole blood
Discovery
Control
GSM2126165
Male
Control-39
whole blood
Discovery
Control
GSM2126166
Female
Control-40
whole blood
Discovery
Control
GSM2126167
Male
Control-41
whole blood
Discovery
Control
GSM2126168
Female
Control-42
whole blood
Discovery
Control
GSM2126169
Male
Control-43
whole blood
Discovery
Control
GSM2126170
Male
Control-44
whole blood
Discovery
Control
GSM2126171
Female
Control-45
whole blood
Discovery
Control
GSM2126172
Female
Control-46
whole blood
Discovery
Control
GSM2126173
Female
Control-47
whole blood
Discovery
Control
GSM2126174
Female
Control-48
whole blood
Discovery
Control
GSM2126175
Male
Control-49
whole blood
Discovery
Control
GSM2126176
Male
Control-50
whole blood
Discovery
Control
GSM2126177
Female
Control-51
whole blood
Discovery
Control
GSM2126178
Male
Control-52
whole blood
Discovery
Control
GSM2126179
Male
Control-53
whole blood
Discovery
Control
GSM2126180
Male
Control-54
whole blood
Discovery
Control
GSM2126181
Female
Control-55
whole blood
Discovery
Control
GSM2126182
Female
Inflammatory 01
whole blood
Validation - inflammatory cohort
HSP
GSM2126183
Female
Inflammatory 02
whole blood
Validation - inflammatory cohort
HSP
GSM2126184
Female
Inflammatory 03
whole blood
Validation - inflammatory cohort
HSP
GSM2126185
Female
Inflammatory 04
whole blood
Validation - inflammatory cohort
HSP
GSM2126186
Female
Inflammatory 05
whole blood
Validation - inflammatory cohort
HSP
GSM2126187
Female
Inflammatory 06
whole blood
Validation - inflammatory cohort
HSP
GSM2126188
Male
Inflammatory 07
whole blood
Validation - inflammatory cohort
HSP
GSM2126189
Male
Inflammatory 08
whole blood
Validation - inflammatory cohort
HSP
GSM2126190
Male
Inflammatory 09
whole blood
Validation - inflammatory cohort
HSP
GSM2126191
Female
Inflammatory 10
whole blood
Validation - inflammatory cohort
HSP
GSM2126192
Male
Inflammatory 11
whole blood
Validation - inflammatory cohort
HSP
GSM2126193
Female
Inflammatory 12
whole blood
Validation - inflammatory cohort
HSP
GSM2126194
Male
Inflammatory 13
whole blood
Validation - inflammatory cohort
HSP
GSM2126195
Male
Inflammatory 14
whole blood
Validation - inflammatory cohort
HSP
GSM2126196
Male
Inflammatory 15
whole blood
Validation - inflammatory cohort
HSP
GSM2126197
Male
Inflammatory 16
whole blood
Validation - inflammatory cohort
HSP
GSM2126198
Male
Inflammatory 17
whole blood
Validation - inflammatory cohort
HSP
GSM2126199
Female
Inflammatory 18
whole blood
Validation - inflammatory cohort
HSP
GSM2126200
Female
Inflammatory 19
whole blood
Validation - inflammatory cohort
JIA
GSM2126201
Female
Inflammatory 20
whole blood
Validation - inflammatory cohort
JIA
GSM2126202
Male
Inflammatory 21
whole blood
Validation - inflammatory cohort
JIA
GSM2126203
Female
Inflammatory 22
whole blood
Validation - inflammatory cohort
JIA
GSM2126204
Female
Inflammatory 23
whole blood
Validation - inflammatory cohort
JIA
GSM2126205
Male
Inflammatory 24
whole blood
Validation - inflammatory cohort
JIA
GSM2126206
Female
Inflammatory 25
whole blood
Validation - inflammatory cohort
JIA
GSM2126207
Male
Inflammatory 26
whole blood
Validation - inflammatory cohort
JIA
GSM2126208
Female
Inflammatory 27
whole blood
Validation - inflammatory cohort
JIA
GSM2126209
Female
Inflammatory 28
whole blood
Validation - inflammatory cohort
JIA
GSM2126210
Female
Inflammatory 29
whole blood
Validation - inflammatory cohort
JIA
GSM2126211
Female
Inflammatory 30
whole blood
Validation - inflammatory cohort
JIA
GSM2126212
Male
Inflammatory 31
whole blood
Validation - inflammatory cohort
JIA
GSM2126213
Male
Inflammatory 32
whole blood
Validation - inflammatory cohort
JIA
GSM2126214
Female
Inflammatory 33
whole blood
Validation - inflammatory cohort
JIA
GSM2126215
Male
Inflammatory 34
whole blood
Validation - inflammatory cohort
JIA
GSM2126216
Male
Inflammatory 35
whole blood
Validation - inflammatory cohort
JIA
GSM2126217
Male
Inflammatory 36
whole blood
Validation - inflammatory cohort
JIA
GSM2126218
Female
Inflammatory 37
whole blood
Validation - inflammatory cohort
JIA
GSM2126219
Male
Inflammatory 38
whole blood
Validation - inflammatory cohort
JIA
GSM2126220
Female
Inflammatory 39
whole blood
Validation - inflammatory cohort
JIA
GSM2126221
Female
Inflammatory 40
whole blood
Validation - inflammatory cohort
JIA
GSM2126222
Female
Inflammatory 41
whole blood
Validation - inflammatory cohort
JIA
GSM2126223
Female
Inflammatory 42
whole blood
Validation - inflammatory cohort
JIA
GSM2126224
Male
Inflammatory 43
whole blood
Validation - inflammatory cohort
JIA
GSM2126225
Female
Inflammatory 44
whole blood
Validation - inflammatory cohort
JIA
GSM2126226
Female
Inflammatory 45
whole blood
Validation - inflammatory cohort
JIA
GSM2126227
Male
Inflammatory 46
whole blood
Validation - inflammatory cohort
JIA
GSM2126228
Female
Inflammatory 47
whole blood
Validation - inflammatory cohort
JIA
GSM2126229
Female
Inflammatory 48
whole blood
Validation - inflammatory cohort
JIA

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